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Eurofins sanger dna sequencing
Sanger Dna Sequencing, supplied by Eurofins, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/sanger+dna+sequencing/sanger+sequencing/pmc12890983-65-28-31
Average 86 stars, based on 1 article reviews
sanger dna sequencing - by Bioz Stars, 2026-10
86/100 stars

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Related Articles

Plasmid Preparation:

Article Title: An Alternative DNA Endonuclease Activity is Associated with the LINE-1 ORF2-encoded Protein
Article Snippet: The products were excised from the gels using a razor blade, purified using a QIAquick Gel Extraction Kit, and cloned into the pCR-Blunt, pCR-II, pCR4-TOPO, or pCR4Blunt-TOPO vectors (Invitrogen). .. Plasmid DNAs were purified as noted above and subjected to Sanger DNA sequencing at the University of Michigan DNA Sequencing Core facility or Eurofins Scientific. ..

Article Title: A modular cell-free protein biosensor platform using split T7 RNA polymerase.
Article Snippet: Plasmid DNA from overnight cultures was purified using EZNA mini prep columns (OMEGA Bio- Tek). .. Plasmid sequences were verified with Sanger DNA sequencing (Eurofins Genomics). .. Sequence- confirmed plasmids were then purified using EZNA midiprep or maxiprep columns (OMEGA Bio- Tek), followed by isopropanol and ethanol precipitation.

Article Title: The sodium leak channel NALCN is regulated by neuronal SNARE complex proteins.
Article Snippet: All deletions, substitutions, and insertions were generated using site- directed mutagenesis with custom- designed primers (Eurofins Genomics/ Sigma- Aldrich) and the Q5 Hot Start High- Fidelity DNA Polymerase (New England Biolabs). cDNAs for each of the candidate interacting proteins were synthesized and cloned into the pCDNA3.1(+) vector commercially (Twist Bioscience). .. Sequences of cDNAs were verified by Sanger DNA sequencing and/or whole- plasmid sequencing (Eurofins). .. For expression in X. laevis oocytes, cDNAs were linearized using Xba I and then transcribed to capped mRNAs with the T7 mMessage mMachine Kit (Ambion).

Article Title: An Alternative DNA Endonuclease Activity is Associated with the LINE-1 ORF2-encoded Protein
Article Snippet: The LEAP products were excised from the gel using a razor blade, purified using a QIAquick Gel Extraction Kit (QIAGEN), and cloned into the pCR-II vector (Invitrogen). .. Plasmid DNAs were purified as described above and were subjected to Sanger DNA sequencing at either the University of Michigan DNA Sequencing Core facility or Eurofins Scientific. .. The Bac-to-Bac Baculovirus Expression System (Invitrogen) was used to produce recombinant ORF2p-3xHA/3xFLAG using minor modifications to a previously described protocol ( ).

Purification:

Article Title: An Alternative DNA Endonuclease Activity is Associated with the LINE-1 ORF2-encoded Protein
Article Snippet: The products were excised from the gels using a razor blade, purified using a QIAquick Gel Extraction Kit, and cloned into the pCR-Blunt, pCR-II, pCR4-TOPO, or pCR4Blunt-TOPO vectors (Invitrogen). .. Plasmid DNAs were purified as noted above and subjected to Sanger DNA sequencing at the University of Michigan DNA Sequencing Core facility or Eurofins Scientific. ..

Article Title: An Alternative DNA Endonuclease Activity is Associated with the LINE-1 ORF2-encoded Protein
Article Snippet: The LEAP products were excised from the gel using a razor blade, purified using a QIAquick Gel Extraction Kit (QIAGEN), and cloned into the pCR-II vector (Invitrogen). .. Plasmid DNAs were purified as described above and were subjected to Sanger DNA sequencing at either the University of Michigan DNA Sequencing Core facility or Eurofins Scientific. .. The Bac-to-Bac Baculovirus Expression System (Invitrogen) was used to produce recombinant ORF2p-3xHA/3xFLAG using minor modifications to a previously described protocol ( ).

DNA Sequencing:

Article Title: An Alternative DNA Endonuclease Activity is Associated with the LINE-1 ORF2-encoded Protein
Article Snippet: The products were excised from the gels using a razor blade, purified using a QIAquick Gel Extraction Kit, and cloned into the pCR-Blunt, pCR-II, pCR4-TOPO, or pCR4Blunt-TOPO vectors (Invitrogen). .. Plasmid DNAs were purified as noted above and subjected to Sanger DNA sequencing at the University of Michigan DNA Sequencing Core facility or Eurofins Scientific. ..

Article Title: A modular cell-free protein biosensor platform using split T7 RNA polymerase.
Article Snippet: Plasmid DNA from overnight cultures was purified using EZNA mini prep columns (OMEGA Bio- Tek). .. Plasmid sequences were verified with Sanger DNA sequencing (Eurofins Genomics). .. Sequence- confirmed plasmids were then purified using EZNA midiprep or maxiprep columns (OMEGA Bio- Tek), followed by isopropanol and ethanol precipitation.

Article Title: Integration of ploidy, Orc1/Cdc6 homolog function, and lysine acetylation with phosphate limitation and UV stress responses of Haloferax volcanii.
Article Snippet: .. Plasmids pJAM4873 (HisOrc1), pJAM4877 (His-Orc10) and pJAM4878 (His-Orc14) were identified among the transformants by PCR screening using the forward and reverse primer pairs (Table S2) and verified by Sanger DNA sequencing (Eurofins Genomics, Louisville, KY, USA). ..

Article Title: Engineering Saccharomyces cerevisiae to improve heterologous abscisic acid production.
Article Snippet: For plasmid and PCR product purification, GeneJet Purification Kits (Thermo Fisher Scientific) were used. .. Sanger DNA sequencing was performed by Eurofins Genomics. .. Primers and other oligonucleotides were ordered from Eurofins Genomics or Integrated DNA Technologies.

Article Title: Engineering Saccharomyces cerevisiae to improve heterologous abscisic acid production
Article Snippet: For plasmid and PCR product purification, GeneJet Purification Kits (Thermo Fisher Scientific) were used. .. Sanger DNA sequencing was performed by Eurofins Genomics. .. Primers and other oligonucleotides were ordered from Eurofins Genomics or Integrated DNA Technologies.

Article Title: The sodium leak channel NALCN is regulated by neuronal SNARE complex proteins.
Article Snippet: All deletions, substitutions, and insertions were generated using site- directed mutagenesis with custom- designed primers (Eurofins Genomics/ Sigma- Aldrich) and the Q5 Hot Start High- Fidelity DNA Polymerase (New England Biolabs). cDNAs for each of the candidate interacting proteins were synthesized and cloned into the pCDNA3.1(+) vector commercially (Twist Bioscience). .. Sequences of cDNAs were verified by Sanger DNA sequencing and/or whole- plasmid sequencing (Eurofins). .. For expression in X. laevis oocytes, cDNAs were linearized using Xba I and then transcribed to capped mRNAs with the T7 mMessage mMachine Kit (Ambion).

Article Title: An Alternative DNA Endonuclease Activity is Associated with the LINE-1 ORF2-encoded Protein
Article Snippet: The LEAP products were excised from the gel using a razor blade, purified using a QIAquick Gel Extraction Kit (QIAGEN), and cloned into the pCR-II vector (Invitrogen). .. Plasmid DNAs were purified as described above and were subjected to Sanger DNA sequencing at either the University of Michigan DNA Sequencing Core facility or Eurofins Scientific. .. The Bac-to-Bac Baculovirus Expression System (Invitrogen) was used to produce recombinant ORF2p-3xHA/3xFLAG using minor modifications to a previously described protocol ( ).

Article Title: Integration of ploidy, Orc1/Cdc6 homolog function, and lysine acetylation with phosphate limitation and UV stress responses of Haloferax volcanii
Article Snippet: .. Plasmids pJAM4873 (His-Orc1), pJAM4877 (His-Orc10) and pJAM4878 (His-Orc14) were identified among the transformants by PCR screening using the forward and reverse primer pairs (Table S2) and verified by Sanger DNA sequencing (Eurofins Genomics, Louisville, KY, USA). ..

Polymerase Chain Reaction:

Article Title: Integration of ploidy, Orc1/Cdc6 homolog function, and lysine acetylation with phosphate limitation and UV stress responses of Haloferax volcanii.
Article Snippet: .. Plasmids pJAM4873 (HisOrc1), pJAM4877 (His-Orc10) and pJAM4878 (His-Orc14) were identified among the transformants by PCR screening using the forward and reverse primer pairs (Table S2) and verified by Sanger DNA sequencing (Eurofins Genomics, Louisville, KY, USA). ..

Article Title: Integration of ploidy, Orc1/Cdc6 homolog function, and lysine acetylation with phosphate limitation and UV stress responses of Haloferax volcanii
Article Snippet: .. Plasmids pJAM4873 (His-Orc1), pJAM4877 (His-Orc10) and pJAM4878 (His-Orc14) were identified among the transformants by PCR screening using the forward and reverse primer pairs (Table S2) and verified by Sanger DNA sequencing (Eurofins Genomics, Louisville, KY, USA). ..

Sequencing:

Article Title: The sodium leak channel NALCN is regulated by neuronal SNARE complex proteins.
Article Snippet: All deletions, substitutions, and insertions were generated using site- directed mutagenesis with custom- designed primers (Eurofins Genomics/ Sigma- Aldrich) and the Q5 Hot Start High- Fidelity DNA Polymerase (New England Biolabs). cDNAs for each of the candidate interacting proteins were synthesized and cloned into the pCDNA3.1(+) vector commercially (Twist Bioscience). .. Sequences of cDNAs were verified by Sanger DNA sequencing and/or whole- plasmid sequencing (Eurofins). .. For expression in X. laevis oocytes, cDNAs were linearized using Xba I and then transcribed to capped mRNAs with the T7 mMessage mMachine Kit (Ambion).



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A Schematic of the MB1 plasmid origin of replication (ORI) mechanism. The RNA primer is transcribed by RNA polymerase (RNAP) and, by default, folds into an RNA structure that is processed by RNase H to create a substrate for <t>DNA</t> polymerase I (Pol I) to initiate DNA replication. The antisense RNA is produced from an overlapping gene, which, if allowed to interact with the RNA primer, induces an alternative fold that does not initiate DNA replication. As the concentration of antisense RNA is proportional to the plasmid copy, this serves as a copy-control negative feedback loop. B Schematic of a refactored pMB1 ORI that separates the RNA primer and antisense RNA gene and introduces inactivating mutations in the P1 promoter <t>sequence.</t> C Shows sequences of mutations to inactivate the P1 promoter encoded inside the RNA primer. (Left graph) Whole-cell fluorescent characterization of the mutant promoters using a fluorescent reporter gene. (Right graph) Relative copy number of plasmids containing the original pMB1 ORI or refactored ORI with an RNA primer containing mutant P1 promoters. Copy number was characterized by encoding a constitutive RFP expression cassette onto the plasmid. Fluorescence characterization was performed (measured in units of fluorescence/optical density (OD) at 600 nm) in E. coli cells. Data show mean values ± SD and individual values of n = 4 biological replicates. Source data for this figure is available in the Source Data file.
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Image Search Results


A Schematic of the MB1 plasmid origin of replication (ORI) mechanism. The RNA primer is transcribed by RNA polymerase (RNAP) and, by default, folds into an RNA structure that is processed by RNase H to create a substrate for DNA polymerase I (Pol I) to initiate DNA replication. The antisense RNA is produced from an overlapping gene, which, if allowed to interact with the RNA primer, induces an alternative fold that does not initiate DNA replication. As the concentration of antisense RNA is proportional to the plasmid copy, this serves as a copy-control negative feedback loop. B Schematic of a refactored pMB1 ORI that separates the RNA primer and antisense RNA gene and introduces inactivating mutations in the P1 promoter sequence. C Shows sequences of mutations to inactivate the P1 promoter encoded inside the RNA primer. (Left graph) Whole-cell fluorescent characterization of the mutant promoters using a fluorescent reporter gene. (Right graph) Relative copy number of plasmids containing the original pMB1 ORI or refactored ORI with an RNA primer containing mutant P1 promoters. Copy number was characterized by encoding a constitutive RFP expression cassette onto the plasmid. Fluorescence characterization was performed (measured in units of fluorescence/optical density (OD) at 600 nm) in E. coli cells. Data show mean values ± SD and individual values of n = 4 biological replicates. Source data for this figure is available in the Source Data file.

Journal: Nature Communications

Article Title: Engineering plasmids with synthetic origins of replication

doi: 10.1038/s41467-026-68907-1

Figure Lengend Snippet: A Schematic of the MB1 plasmid origin of replication (ORI) mechanism. The RNA primer is transcribed by RNA polymerase (RNAP) and, by default, folds into an RNA structure that is processed by RNase H to create a substrate for DNA polymerase I (Pol I) to initiate DNA replication. The antisense RNA is produced from an overlapping gene, which, if allowed to interact with the RNA primer, induces an alternative fold that does not initiate DNA replication. As the concentration of antisense RNA is proportional to the plasmid copy, this serves as a copy-control negative feedback loop. B Schematic of a refactored pMB1 ORI that separates the RNA primer and antisense RNA gene and introduces inactivating mutations in the P1 promoter sequence. C Shows sequences of mutations to inactivate the P1 promoter encoded inside the RNA primer. (Left graph) Whole-cell fluorescent characterization of the mutant promoters using a fluorescent reporter gene. (Right graph) Relative copy number of plasmids containing the original pMB1 ORI or refactored ORI with an RNA primer containing mutant P1 promoters. Copy number was characterized by encoding a constitutive RFP expression cassette onto the plasmid. Fluorescence characterization was performed (measured in units of fluorescence/optical density (OD) at 600 nm) in E. coli cells. Data show mean values ± SD and individual values of n = 4 biological replicates. Source data for this figure is available in the Source Data file.

Article Snippet: All assembled plasmids were verified using Sanger DNA sequencing (Genewiz) or Nanopore sequencing (Plasmidsaurus).

Techniques: Plasmid Preparation, Produced, Concentration Assay, Control, Sequencing, Mutagenesis, Expressing, Fluorescence

A SynORI plasmids (pSynORI) can be programmed to convert distinct chemical signals into DNA copy output using transcriptional regulators to control RNA primer transcription. Relationship between relative copy number and chemical input for pSynORI built using (B) Plac (activated by IPTG), C PcymR (activated by cumate), D the ZTP riboswitch (activated by Z), E and the yxjA riboswitch (repressed by 2AP). F Matrix showing the relative copy of a pSynORI that is activated by cumate and repressed by IPTG with inducer titrations. Relative copy number was characterized by encoding a constitutive RFP expression cassette onto the plasmid in E. coli cells (measured in units of fluorescence/optical density [OD] at 600 nm). G Schematic of compatible and inducible pSynORI that converts chemical input signals into a DNA copy, which can be read using sequencing. A pSC101 plasmid with a non-inducible copy number is included as a reference. H The relative copy of pSynORI A and B was calculated using the reference plasmid. Bar plots show the DNA copy ratio of pSynORI A and B. Data in B – E and F shows n = 4 biological replicates, and Data in H show n = 3 biological replicates. All error bands indicate SD. Source data for this figure is available in the Source Data file.

Journal: Nature Communications

Article Title: Engineering plasmids with synthetic origins of replication

doi: 10.1038/s41467-026-68907-1

Figure Lengend Snippet: A SynORI plasmids (pSynORI) can be programmed to convert distinct chemical signals into DNA copy output using transcriptional regulators to control RNA primer transcription. Relationship between relative copy number and chemical input for pSynORI built using (B) Plac (activated by IPTG), C PcymR (activated by cumate), D the ZTP riboswitch (activated by Z), E and the yxjA riboswitch (repressed by 2AP). F Matrix showing the relative copy of a pSynORI that is activated by cumate and repressed by IPTG with inducer titrations. Relative copy number was characterized by encoding a constitutive RFP expression cassette onto the plasmid in E. coli cells (measured in units of fluorescence/optical density [OD] at 600 nm). G Schematic of compatible and inducible pSynORI that converts chemical input signals into a DNA copy, which can be read using sequencing. A pSC101 plasmid with a non-inducible copy number is included as a reference. H The relative copy of pSynORI A and B was calculated using the reference plasmid. Bar plots show the DNA copy ratio of pSynORI A and B. Data in B – E and F shows n = 4 biological replicates, and Data in H show n = 3 biological replicates. All error bands indicate SD. Source data for this figure is available in the Source Data file.

Article Snippet: All assembled plasmids were verified using Sanger DNA sequencing (Genewiz) or Nanopore sequencing (Plasmidsaurus).

Techniques: Control, Expressing, Plasmid Preparation, Fluorescence, Sequencing